Photo by JNTO

Best Boutique Hotels in Shinjuku
- Change your mindBook hotels with free cancellation
- Be pickySearch almost a million properties worldwide
Check availability on Shinjuku Boutique Hotels
Our top choices for Shinjuku boutique hotels
The price is RM996
RM1,268 total
30 Jun - 1 Jul
The price is RM2,534
RM3,205 total
8 Jul - 9 Jul
The price is RM1,788
RM2,262 total
6 Jul - 7 Jul
The price is RM1,911
RM2,417 total
17 Jul - 18 Jul
The price is RM2,638
RM3,347 total
1 Jul - 2 Jul
The price is RM2,232
RM2,833 total
10 Jul - 11 Jul

9.0 out of 10, Wonderful, (1,018 reviews)
The price is RM684
RM752 total
24 Jun - 25 Jun

9.4 out of 10, Exceptional, (1,023 reviews)
The price is RM340
RM411 total
21 Jun - 22 Jun
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Top Shinjuku Hotel Reviews

Shinjuku Granbell Hotel
10/10 Excellent
Frequently asked questions
Explore a world of travel with Expedia
- 3 Star Hotels in Shinjuku
- 4 Star Hotels in Shinjuku Golden Gai
- 4 Star Hotels in Shinjuku
- 5 Star Hotels in Shinjuku
- Hotels near Chichibunomiya Rugby Stadium
- Gay friendly Hotels in Tokyo Prefecture
- Tokyo Prefecture Hotels
- Resorts in Higashi-nakano Station
- Hotels near Isetan Department Store Shinjuku
- Daiwa Roynet Hotels in Kabukicho
- Fujita Kanko Hotels in Kabukicho
- Hokke Club Hotels in Kabukicho
- Hotels with Airport Shuttle in Kabukicho
- Hotels with smoking rooms in Kabukicho
- Livemax Hotels in Kabukicho
- Romantic Hotels in Kabukicho
- Kabukicho Hotels
- Apartments in Kokuritsu-kyogijo Station
- Hotels near Minami-Shinjuku Station
- Nishi-Shinjuku Hotels
- Hotels near Ochiai Station
- Okubo Hotels
- Hotels near Seibu-Shinjuku Station
- Sendagaya Hotels
- Boutique Hotels in Shibuya
- Budget Hotels in Shibuya
- Hotels with free breakfast in Shibuya
- Hotels with free parking in Shibuya
- Romantic Hotels in Shibuya
- Hotels near Shin-Okubo Station
- Shinjuku Golden Gai Hotels
- Hotels near Shinjuku Gyoen National Garden
- Hotels near Shinjuku Isetan
- Hotels near Shinjuku Subnade
- Accor Hotels in Shinjuku
- Apa Hotels in Shinjuku
- Budget Hotels in Shinjuku
- Business Hotels in Shinjuku
- Family friendly Hotels in Shinjuku
- Fujita Kanko Hotels in Shinjuku
- Gay friendly Hotels in Shinjuku
- Hotels with Early Check in in Shinjuku
- Hotels with Airport Shuttle in Shinjuku
- Hotels with Breakfast in Shinjuku
- Hotels with connecting rooms in Shinjuku
- Hotels with free breakfast in Shinjuku
- Hotels with Gyms in Shinjuku
- Hotels with indoor pool in Shinjuku
- Hotels with kitchenette in Shinjuku
- Hotels with Swimming Pools in Shinjuku
- Hotels with Restaurants in Shinjuku
- Hotels with shuttle in Shinjuku
- Hotels with smoking rooms in Shinjuku
- Luxury Hotels in Shinjuku
- Mandarin Oriental Hotel Group in Shinjuku
- Pet friendly Hotels in Shinjuku
- Romantic Hotels in Shinjuku
- Hotels with Spa in Shinjuku
- Shinjuku Hotels
- Hotels near Takadanobaba Station
- Takadanobaba Hotels
- Hotels with Airport Shuttle in Tokyo
- Tokyo Hotels
- Cruise Ships in Tokyo Prefecture
- Hotels near Tokyu Kabukicho Tower
- Hotels near Ushigome-yanagicho Station
- Hotels near Waseda University
- Yotsuya Hotels
- Akasaka Palace
- Chinzan-So Garden
- Japan Olympic Museum
- Josenin Temple
- Kaichuinari Shrine
- Meiji-Jingu Gaien Ice Skating Rink
- Meiji Jingu Shrine
- Ninja Trick House In Tokyo
- Ntt DoCoMo Yoyogi Building
- Okubo Park
- Shinjuku Batting Center
- Shinjuku Gyoen National Garden
- Shinjuku Isetan
- Shinjuku Holidays
- Visit Harajuku
- Visit Kabukicho
- Visit Nishi-Shinjuku
- Visit Shinjuku
- Toto Tokyo Center Showroom
- Yoyogi Park































