Top 10 Hotels Near Labuan Bajo Port in Labuan Bajo for 2026

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Our top choices for Labuan Bajo Port hotels

A coastal landscape with a small island, clear waters, and distant mountains.

A spacious lobby with wicker furniture, a bar area, and a sign for Meruora Hotel.

A poolside area with lounge chairs and a view of a harbor with boats.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

1. Meruorah Komodo Labuan Bajo

0.3 km from Labuan Bajo Port

Constance

RM495

RM599 total

includes taxes & fees

15 Oct - 16 Oct

A pool area with lounge chairs and umbrellas, a wooden deck, and a mountain in the background.

A rooftop terrace with a curved seating area, a small table, and a pergola structure.

A corridor with white walls, blue shutters, and a wooden ceiling.

A modern bedroom with a large bed, bedside tables, a hanging light fixture, and built-in shelving with storage boxes.

2. Seaesta Komodo Hotel & Hostel

0.3 km from Labuan Bajo Port

iain

RM252

RM305 total

includes taxes & fees

13 Oct - 14 Oct

A poolside area with lounge chairs and a view of the sea and boats.

A modern bedroom with a wooden bed, a desk, and a chair.

A wooden bench with cushions, a hanging light fixture, and a view of a coastal town.

A room with a wooden wardrobe, a desk with a chair, a mirror, and a television.

3. OhJulia Hotel Komodo

0.2 km from Labuan Bajo Port

Kizzy

RM291

RM353 total

includes taxes & fees

20 Oct - 21 Oct

A large sliding glass door leading to a balcony with a view of a coastal area, including buildings and greenery.

A modern bathroom with a large mirror, a white basin, and a wooden vanity.

A modern hotel room with a glass dining table, two chairs, a coffee maker, and a chandelier.

A multi-story hotel with balconies, a rooftop bar, and a sign for a diving center.

4. DEJAVU 2.0 HOTEL LABUAN BAJO KOMODO

0.1 km from Labuan Bajo Port

Aya

RM131

RM159 total

includes taxes & fees

16 Oct - 17 Oct

A swimming pool with a lighthouse and boats in the background.

A reception desk with a sign reading "RECEPTION" and a wall with the text "HAOUR KOMODO HOTEL".

A hotel room with a bed, a desk, a TV, a chair, and a window with a view of a building.

A modern hotel room with a large bed, two wooden chairs, a TV, and a painting on the wall.

5. Harbour Komodo Hotel

0.3 km from Labuan Bajo Port

Peter

RM166

RM201 total

includes taxes & fees

3 Oct - 4 Oct

A wooden deck with a pool, overlooking a marina with boats and islands.

A narrow hallway leading to a room with a large window, a bench, and a wooden door.

A room with a bed, a desk, a window with a view, and a ceiling fan.

A wooden house with a tiled roof, a pool, and a deck with lounge chairs and an umbrella.

6. Bayview Gardens Hotel

0.3 km from Labuan Bajo Port

A balcony with a view of a marina, boats, and a pier.

A modern hotel room with a neatly made bed, a bedside table, a chair, and a desk with a mirror and toiletries.

A modern lobby with seating, a reception desk, and a wall-mounted sign.

A modern kitchen with a built-in bar area, featuring a granite countertop, dark cabinetry, and a decorative wooden wall panel.

7. Flamingo Ceria

0.2 km from Labuan Bajo Port

Reyna

RM153

RM185 total

includes taxes & fees

19 Oct - 20 Oct

A coastal marina with boats docked, a pier, and a mountainous backdrop during sunset.

An outdoor patio with wooden tables and chairs, potted plants, and a view of the sea.

A bedroom with a large bed, a green wall, a round decorative item above the bed, and a view through a glass door.

A hallway with a green door, a bed with a green bedspread, and a small garden area with plants and pebbles.

8. Eco Tree O'tel

0.3 km from Labuan Bajo Port

kevin

RM164

RM198 total

includes taxes & fees

21 Oct - 22 Oct

A bedroom with a large bed, a desk, and a view of the outdoors.

A bedroom with a large bed, wooden headboard, a nightstand, a dresser, a TV, and a view of the outdoors.

A room with a wooden table, two black chairs, a window with a view of trees, and a TV mounted on the wall.

A modern kitchen with a wooden countertop, a built-in sink, and a flat-screen TV mounted on the wall.

9. Komodo Suites Downtown

0.3 km from Labuan Bajo Port

Eliel

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

A wooden pier with a gazebo, tables, and umbrellas extending into a clear blue sea.

A hotel room with a bed, a desk, a chair, a table with fruits, and a view of a mountain and water.

10. AYANA Komodo Waecicu Beach

2.8 km from Labuan Bajo Port

Marvin

RM688

RM833 total

includes taxes & fees

23 Sept - 24 Sept

An outdoor dining area with wooden tables and chairs, overlooking a scenic view of the sea and hills.

A modern hotel room with a large bed, a TV, a sofa, and a view of the city.

A bakery with a display counter, shelves with baked goods, and a wall with inspirational quotes.

A poolside area with wooden deck, seating, and a view of the ocean.

11. ZASGO HOTEL

0.9 km from Labuan Bajo Port

Troy

RM200

RM243 total

includes taxes & fees

23 Sept - 24 Sept

A modern hotel with a pool area, lounge chairs, and umbrellas.

A modern interior with a bar area, seating, and a view of a lush garden.

A coastal landscape with a clear beach, boats, and mountainous terrain.

A spacious lobby with a modern design, featuring a large seating area, a dining space, and a view of the outdoors.

12. Crowne Plaza Labuan Bajo by IHG

1.5 km from Labuan Bajo Port

nicole

RM639

RM773 total

includes taxes & fees

17 Oct - 18 Oct

A building with a balcony covered in hanging vines, a staircase, and a view of a body of water.

A wooden dining table with benches, a red cushioned chair, a mirror, and two bottles of water.

A reception desk at Komodo Lodge with a wooden backdrop, a TV screen, and a sign indicating the location of the toilet.

A hotel room with a large bed, a desk with a chair, a small round table, a wooden bench, a window with curtains, and a door.

13. Komodo Lodge

0.4 km from Labuan Bajo Port

Mark

RM141

RM171 total

includes taxes & fees

9 Oct - 10 Oct

An outdoor swimming pool with checkered tiles, a view of boats on the water, and a seating area with tables and chairs.

A waterfront bar with wooden stools and a view of boats and a pier.

A hotel room with a large bed, wooden headboard, a nightstand with a lamp, a small table with a chair, a mirror, and a wardrobe.

A reception desk with a clock-themed wallpaper, a wooden reception desk, and a sign that reads "FLAMINGO AVIA".

14. Flamingo Avia Labuan Bajo

0.4 km from Labuan Bajo Port

William

RM128

RM155 total

includes taxes & fees

8 Oct - 9 Oct

A swimming pool with white buildings and blue doors.

A reception area with marble walls, potted plants, and a modern design.

A bedroom with two beds, a TV, a desk, and a view of the beach.

A dining area with a view of the sea and a sunset, featuring round tables with placemats and white tablecloths.

15. Loccal Collection Hotel

1.1 km from Labuan Bajo Port

Veronica

RM284

RM343 total

includes taxes & fees

9 Oct - 10 Oct

A modern hotel room with a large bed, a desk, and a view of the outdoors.

An elevator with a metallic interior, a stone wall adjacent to it, and a control panel with a green indicator.

A hotel entrance with a sign reading "TRIPLE SUITES".

A modern kitchen with a wooden countertop, a sink, and a dining area with a table and chairs. There is a sofa with cushions and a painting on the wall.

16. Triple 888 Suites

0.4 km from Labuan Bajo Port

Takeshi

RM141

RM284 total

includes taxes & fees

16 Oct - 17 Oct

A pool area with a view of the sea and boats, surrounded by lush greenery and a wooden building.

A room with a bed under a canopy, wooden walls, and a view of the outdoors.

A person sitting on a grey couch reading a book.

A room with a bed, curtains, a lamp, and a view of greenery outside.

17. Selini Hills

0.7 km from Labuan Bajo Port

Jennifer

RM183

RM222 total

includes taxes & fees

7 Oct - 8 Oct

A balcony with two chairs and a table, overlooking a scenic view of a coastal area with buildings and greenery.

A hotel room with two beds, a balcony with a view of the sea and mountains, and a small table.

A modern building with a flat roof, multiple balconies, and a stone base.

A multi-story building with balconies, surrounded by greenery and plants.

18. La Colina Komodo Hotel

0.6 km from Labuan Bajo Port

Arnaud

RM127

RM154 total

includes taxes & fees

25 Sept - 26 Sept

A poolside view with thatched-roof structures and palm trees at sunset.

An aerial view of a resort with a swimming pool, palm trees, and red-roofed buildings.

A hotel with a pool, a pier, and boats on the water.

A beach with overwater bungalows and a pier extending into calm waters.

19. LAPRIMA Hotel Flores

1.3 km from Labuan Bajo Port

Soini

RM226

RM274 total

includes taxes & fees

20 Oct - 21 Oct

A two-story building with balconies, large windows, and a flat roof.

A multi-level building with a central staircase, outdoor seating area with tables and chairs, and lush greenery.

A bathroom with a sink, mirror, shower, and a blue door.

A hotel room with two beds, a desk, and a view of the outdoors.

20. Hotel Bonne Nuit

1 km from Labuan Bajo Port

Tereza

RM66

RM88 total

includes taxes & fees

23 Oct - 24 Oct

View all properties

Compare popular hotels close to Labuan Bajo Port

Property	Property class	Guest rating
AYANA Komodo Waecicu Beach	9.6 Exceptional 126 reviews	View
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo	10.0 Exceptional 34 reviews	View
Katamaran Hotel & Resort Komodo	9.4 Exceptional 102 reviews	View
Meruorah Komodo Labuan Bajo	9.0 Wonderful 223 reviews	View
Centro Bajo Hotel	9.0 Wonderful 24 reviews	View

Top Labuan Bajo Port Hotel Reviews

ZASGO HOTEL

8/10 Good

"Very convenient to have a store, pharmacy and restaurant all on the same site"

Seaesta Komodo Hotel & Hostel

10/10 Excellent

"Bar was very chilled, great vibes"

LAPRIMA Hotel Flores

10/10 Excellent

"Beautiful view of the beach and it’s very convenient location."

Katamaran Hotel & Resort Komodo

10/10 Excellent

"Balcony with nice sea view and sunset view"

Meruorah Komodo Labuan Bajo

8/10 Good

"We were a group of seven and waited around 30 minutes for the airport pickup, followed by another 30 minutes to check in. There were only two staff members handling check-in. The staff were lovely and efficient, but the hotel definitely seemed understaffed given the number of incoming guests. Management may need to look at this. The view is nice, although it can be quite noisy with boats. The telephone in the room was never answered, so if we needed anything, we had to go downstairs. As mentioned in other reviews, there were no hand towels, and the floor towels were not changed during our stay. We stayed here mainly for the convenience of the port, as I was diving every day. For that purpose, it was fine. However, next time I would probably stay a little further away, as Grab bikes are very easy and affordable. Many of the better restaurants are also away from the main street. Overall, the staff were friendly and the location was convenient, but the hotel could definitely improve its staffing and housekeeping."

Flamingo Avia Labuan Bajo

8/10 Good

"My review would have been a 5 star except the room for my daughter on the first floor was horribly moldy. There were no other rooms so she moved to my room on the second floor. If you can be guaranteed a room on second floor or above, I would stay here. The breakfast area was on the top floor with a beautiful view of the harbor. Staff was very helpful and let us leave our bags there while we went on a tour."

La Colina Komodo Hotel

8/10 Good

"Nice view. The rooms are very simple and comfortable for a short stay but not more. Helpful staff to get your luggage up the hill and stairs."

Crowne Plaza Labuan Bajo by IHG

10/10 Excellent

"Great"

Inn Room Hotel Bajo

8/10 Good

"The place was really small, I didn't mind it but just know it's basically the bed and a small desk area. The fragrance in the towels and bed sheets made me sick, really strong but then again I don't use scented laundry detergents at home. The free drink was horrible, really sugary wish I could have substituted it went to waste. I like that the bed was comfortable which is important to me when I'm traveling. The staff was super friendly and helpful. I chose a room with a window it would have been really claustrophobic feeling if I didn't."

Other attractions near Labuan Bajo Port

Waecicu Beach

8.2/10 (19 reviews)

Why not spend a care-free afternoon at Waecicu Beach during your travels in Labuan Bajo? Wander the gardens or discover the area's sunsets.

See properties

Plaza Marina Labuan Bajo

You can search for that perfect souvenir at Plaza Marina Labuan Bajo during your stay in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Pede Labuan Beach

8.2/10 (19 reviews)

If a restful holiday is part of your travel plans, Pede Labuan Beach might be the perfect place to visit during your trip to Labuan Bajo. Wander the gardens or discover the area's sunsets.

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Batu Cermin Cave

8.6/10 (23 reviews)

Explore the great outdoors at Batu Cermin Cave, a lovely green space in Labuan Bajo. Wander the beaches and gardens in the area.

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Sylvia Hill

8.8/10 (3 reviews)

Commune with nature and explore the great outdoors at Sylvia Hill during your travels in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Frequently asked questions

What's the area like around Labuan Bajo Port?

Labuan Bajo Port is located in an area of Labuan Bajo that travellers like for its island views, beaches and sunsets. If you're looking for a convenient place to stay, take a look at the 101 hotels and other accommodation options you'll find within a mile.

What's the best hotel to stay near Labuan Bajo Port?

Adjacent to Labuan Bajo Port, Meruorah Komodo Labuan Bajo is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and a full-service spa. Other good options within a short distance include Harbour Komodo Hotel and ZASGO HOTEL.

How many hotels will I find near Labuan Bajo Port?

Expedia has 101 hotels and other accommodation options within a mile from Labuan Bajo Port.

If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?

Yes! You'll find that most hotel bookings are fully refundable if you cancel prior to the hotel's cancellation deadline, which often is within 24-48 hours of your arrival date. If your reservation is non-refundable, you might still have the option to cancel and receive a refund within a 24-hour period of your booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to get the best options available near Labuan Bajo Port.

What can I see and do near Labuan Bajo Port?

Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. Rangko Cave is also located 7.3 mi from Labuan Bajo Port, and Cunca Wulang Waterfall is 8.8 mi away.

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Things to do in Labuan Bajo

Hotels near Labuan Bajo Port

Change your mind

Treat yourself

Be picky

Check prices for these dates

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Star rating

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Our top choices for Labuan Bajo Port hotels

1. Meruorah Komodo Labuan Bajo

2. Seaesta Komodo Hotel & Hostel

3. OhJulia Hotel Komodo

4. DEJAVU 2.0 HOTEL LABUAN BAJO KOMODO

5. Harbour Komodo Hotel

6. Bayview Gardens Hotel

7. Flamingo Ceria

8. Eco Tree O'tel

9. Komodo Suites Downtown

10. AYANA Komodo Waecicu Beach

11. ZASGO HOTEL

12. Crowne Plaza Labuan Bajo by IHG

13. Komodo Lodge

14. Flamingo Avia Labuan Bajo

15. Loccal Collection Hotel

16. Triple 888 Suites

17. Selini Hills

18. La Colina Komodo Hotel

19. LAPRIMA Hotel Flores

20. Hotel Bonne Nuit

Compare popular hotels close to Labuan Bajo Port

Top Labuan Bajo Port Hotel Reviews

ZASGO HOTEL

Seaesta Komodo Hotel & Hostel

LAPRIMA Hotel Flores

Katamaran Hotel & Resort Komodo

Meruorah Komodo Labuan Bajo

Flamingo Avia Labuan Bajo

La Colina Komodo Hotel

Crowne Plaza Labuan Bajo by IHG

Inn Room Hotel Bajo

Other attractions near Labuan Bajo Port

Waecicu Beach

Plaza Marina Labuan Bajo

Pede Labuan Beach

Batu Cermin Cave

Sylvia Hill

Frequently asked questions

Explore a world of travel with Expedia