Hotels near Labuan Bajo Port

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Our top choices for Labuan Bajo Port hotels

Seaesta Komodo Hotel & Hostel

Seaesta Komodo Hotel & Hostel
3.0 star property
0.2 km from Labuan Bajo Port
9.4 out of 10, Exceptional, (82)
"Lovely chilled atmosphere, was busy but not crowded, great place to stay, music each night, food good"
United Kingdom
Jamie
Seaesta Komodo Hotel & Hostel

Harbour Komodo Hotel

Harbour Komodo Hotel
2.5 star property
0.2 km from Labuan Bajo Port
9.0 out of 10, Wonderful, (117)
"I can’t say enough about this property. Everything from start to finish was perfect. The staff rocked like no other and the hotel’s location was perfect. I will definitely stay here again "
United States
Jeff
Harbour Komodo Hotel

Komodo Suites Downtown

Komodo Suites Downtown
2.0 star property
0.2 km from Labuan Bajo Port
9.4 out of 10, Exceptional, (23)
"Great place to stay!!"
United States
Eliel
The price is RM196
RM237 total
includes taxes & fees
27 Dec - 28 Dec
Komodo Suites Downtown

Meruorah Komodo Labuan Bajo

Meruorah Komodo Labuan Bajo
5.0 star property
0.3 km from Labuan Bajo Port
8.8 out of 10, Excellent, (137)
"nice hotel, nice view, convenient to get to the pier the next morning. "
France
Christelle
The price is RM423
RM512 total
includes taxes & fees
25 Dec - 26 Dec
Meruorah Komodo Labuan Bajo

TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo
5.0 star property
1.9 km from Labuan Bajo Port
9.8 out of 10, Exceptional, (20)
"The resort is a greace "
United Kingdom
Fraser
The price is RM1,205
RM1,458 total
includes taxes & fees
7 Jan - 8 Jan 2026
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

Komodo Lodge

Komodo Lodge
3.0 star property
0.4 km from Labuan Bajo Port
8.2 out of 10, Very good, (76)
"Nice place close to the town "
United Kingdom
Lisa
The price is RM165
RM200 total
includes taxes & fees
25 Dec - 26 Dec
Komodo Lodge

Katamaran Hotel & Resort Komodo

Katamaran Hotel & Resort Komodo
5.0 star property
2.4 km from Labuan Bajo Port
9.6 out of 10, Exceptional, (47)
"It's one of the best hotels we'd ever stayed at... and we stayed at quite a few over the years! Stunning setting on the cliff, beautiful open space lobby, spacious brand new room with the very clean bathroom, beautiful views from the balcony, very helpful staff, and delicious breakfast with lots of choices! "
United States
Lira
Katamaran Hotel & Resort Komodo

Centro Bajo Hotel

Centro Bajo Hotel
3.0 star property
1.7 km from Labuan Bajo Port
9.0 out of 10, Wonderful, (22)
"The free airport transfer was super helpful and very attentive staff!"
United States
Gabriel
Centro Bajo Hotel

Flamingo Ceria

Flamingo Ceria
3.0 star property
0.2 km from Labuan Bajo Port
8.0 out of 10, Very good, (7)
"I booked a room at Flamingo Ceria After arriving they informed me that they moved me to Flamingo Avia, a sister property. The bed was decent, the shower was tiny, but small. The AC worked. The restaurant up top had a limited menu, but it was tasty."
United States
Reyna
The price is RM134
RM163 total
includes taxes & fees
7 Jan - 8 Jan 2026
Flamingo Ceria

Palulu Garden Homestay

Palulu Garden Homestay
2.5 star property
0.3 km from Labuan Bajo Port
8.0 out of 10, Very good, (8)
"Very very friendly and welcoming hosts - speaking very good English. Delicious breakfast with homeroasted coffee Wonderful surrounding garden with chickens and cute cats. Would come back any time again."
Germany
Jonathan
Palulu Garden Homestay

ZASGO HOTEL

ZASGO HOTEL
4.0 star property
0.9 km from Labuan Bajo Port
8.4 out of 10, Very good, (86)
"Stunning view and good breakfast from the rooftop"
Canada
Fanny
The price is RM136
RM164 total
includes taxes & fees
28 Dec - 29 Dec
ZASGO HOTEL

AYANA Komodo Waecicu Beach

AYANA Komodo Waecicu Beach
5.0 star property
2.8 km from Labuan Bajo Port
9.6 out of 10, Exceptional, (93)
"Amazing property, we loved our stay!"
Canada
Shannon G.
The price is RM687
RM832 total
includes taxes & fees
4 Jan - 5 Jan 2026
AYANA Komodo Waecicu Beach

World BnB

World BnB
3.0 star property
2.3 km from Labuan Bajo Port
9.0 out of 10, Wonderful, (43)
"-"
Spain
Esther
World BnB

Hotel Bonne Nuit

Hotel Bonne Nuit
3.0 star property
1 km from Labuan Bajo Port
8.2 out of 10, Very good, (41)
"Staff were very good and could do enough, location is great for the airport, breakfast was lovely. "
United Kingdom
Ben
The price is RM73
RM94 total
includes taxes & fees
30 Dec - 31 Dec
Hotel Bonne Nuit

DEJAVU 2.0 HOTEL LABUAN BAJO KOMODO

DEJAVU 2.0 HOTEL LABUAN BAJO KOMODO
3.5 star property
< 0.1 km from Labuan Bajo Port
7.4 out of 10, Good, (65)
"Staff is excellent. Room was good. Balcony looked onto the port, which is noisy. However, I would definitely stay again. Particularly if you are doing a liveaboard scuba trip, the hotel is right next to the port."
United States
John
The price is RM125
RM152 total
includes taxes & fees
5 Jan - 6 Jan 2026
DEJAVU 2.0 HOTEL LABUAN BAJO KOMODO

Eco Tree O'tel

Eco Tree O'tel
3.5 star property
0.3 km from Labuan Bajo Port
7.2 out of 10, Good, (104)
"Great stay!! Stayed for just 1 night after a boat trip but wished i had stayed longer to explore the area! "
United States
Christine
Eco Tree O'tel

Bintang Flores Hotel

Bintang Flores Hotel
4.0 star property
1.8 km from Labuan Bajo Port
8.2 out of 10, Very good, (161)
"The staff were so friendly, pool was beautiful and the breakfast buffet selection was great! Easy walk to town or restaurants! "
Canada
Heidi
The price is RM769
RM931 total
includes taxes & fees
6 Jan - 7 Jan 2026
Bintang Flores Hotel

Loccal Collection Hotel

Loccal Collection Hotel
4.0 star property
1 km from Labuan Bajo Port
7.4 out of 10, Good, (50)
"Views from hotel were amazing, and a good location near the town, although limited options for getting around if you don't have a car/bike. Sometimes the staff took a while to serve you, but were extremely friendly. "
Australia
Emma
The price is RM296
RM359 total
includes taxes & fees
6 Jan - 7 Jan 2026
Loccal Collection Hotel

OhJulia Hotel Komodo

OhJulia Hotel Komodo
3.5 star property
0.2 km from Labuan Bajo Port
8.8 out of 10, Excellent, (3)
"Great people attentive kind"
United States
JAMES
The price is RM238
RM288 total
includes taxes & fees
23 Jan - 24 Jan 2026
OhJulia Hotel Komodo

Flamingo Avia Labuan Bajo

Flamingo Avia Labuan Bajo
3.0 star property
0.4 km from Labuan Bajo Port
7.4 out of 10, Good, (9)
"Great location, nice pool and view. Breakfast overlooking the ocean each morning is lovely. Very good hotel and friendly staff. "
Australia
Vincent
The price is RM169
RM205 total
includes taxes & fees
26 Dec - 27 Dec
Flamingo Avia Labuan Bajo
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Labuan Bajo Port Hotel Reviews

Hotels near other Labuan Bajo Port attractions

Frequently asked questions

What's the area like around Labuan Bajo Port?
Labuan Bajo Port is located in an area of Labuan Bajo that travellers like for its island views, beaches and sunsets. If you're looking for a convenient place to stay, take a look at the 85 hotels and other accommodation options you'll find within a mile.
What's the best hotel to stay near Labuan Bajo Port?
Adjacent to Labuan Bajo Port, Seaesta Komodo Hotel & Hostel is one of the top choices for your stay based on our traveller data, and this hotel offers 2 bars and a restaurant. Other good options within a short distance include Meruorah Komodo Labuan Bajo and Harbour Komodo Hotel.
How many hotels will I find near Labuan Bajo Port?
Expedia has 85 hotels and other accommodation options within a mile from Labuan Bajo Port.
If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?
Yes! You'll find that most hotel bookings are fully refundable if you cancel prior to the hotel's cancellation deadline, which often is within 24-48 hours of your arrival date. If your reservation is non-refundable, you might still have the option to cancel and receive a refund within a 24-hour period of your booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to get the best options available near Labuan Bajo Port.
What can I see and do near Labuan Bajo Port?
Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. A visit to St. Angela Labuan Bajo is worth the trip when you're visiting.

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