Mission bay, San Diego, CA

Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,474 reviews)
"Great resort!"
United States
Jean-Michelle
The price is RM1,173
RM1,564 total
includes taxes & fees
14 Jun - 15 Jun
San Diego Mission Bay Resort

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,653 reviews)
"This was a beautiful place to stay. Right by the water, staff was very helpful, restaurant's were good"
United States
Myesha
The price is RM1,069
RM1,443 total
includes taxes & fees
14 Jun - 15 Jun
Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,632 reviews)
"Amazing place!"
United States
Yesenia
The price is RM767
RM1,097 total
includes taxes & fees
14 Jun - 15 Jun
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,399 reviews)
"Beautiful property, very helpful staff, great location"
United States
Jamie
The price is RM932
RM1,188 total
includes taxes & fees
16 Jun - 17 Jun
The Dana on Mission Bay

Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.2 out of 10, Very good, (1,038 reviews)
"Always a great stay."
United States
amanda
The price is RM508
RM585 total
includes taxes & fees
30 Jun - 1 Jul
Crowne Plaza San Diego - Mission Valley by IHG

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
28.6 km from Mission Bay
8.8 out of 10, Excellent, (1,298 reviews)
"Room is nice, clean, & breakfast is good. We always stay here when in the area."
United States
Travis
The price is RM498
RM567 total
includes taxes & fees
5 Jul - 6 Jul
Best Western Americana Inn

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
8.1 km from Mission Bay
9.4 out of 10, Exceptional, (1,703 reviews)
"Lovely hotel, very aesthetic place"
United States
Roxana
The price is RM1,011
RM1,162 total
includes taxes & fees
16 Jun - 17 Jun
Lafayette Hotel & Club

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (3,882 reviews)
"Great stay"
United States
Cameron
The price is RM693
RM764 total
includes taxes & fees
16 Jun - 17 Jun
Best Western Plus Marina Gateway Hotel

Holiday Inn Express San Diego South - Chula Vista by IHG

Holiday Inn Express San Diego South - Chula Vista by IHG
2.5 star property
19.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,231 reviews)
"Room fit our family of 6 and the breakfast was good."
United States
Jamie
The price is RM666
RM733 total
includes taxes & fees
7 Jul - 8 Jul
Holiday Inn Express San Diego South - Chula Vista by IHG

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,524 reviews)
"Great location and shuttle service to and from the airport."
Canada
Malinda
The price is RM646
RM948 total
includes taxes & fees
5 Jul - 6 Jul
Sheraton San Diego Resort

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,730 reviews)
"Good location, clean room and nice staff. A great place to stay."
United States
Patricia
The price is RM698
RM803 total
includes taxes & fees
28 Jun - 29 Jun
Hampton Inn & Suites San Diego Airport Liberty Station

Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
8.7 km from Mission Bay
9.0 out of 10, Wonderful, (1,821 reviews)
"We really enjoyed staying here, breakfast was good, staff was great, really clean, we recommend this hotel"
United States
Francesca Elisa
The price is RM783
RM1,056 total
includes taxes & fees
25 Jun - 26 Jun
Embassy Suites by Hilton San Diego Bay Downtown

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,135 reviews)
"Enjoyed my stay."
United States
Oswaldo
The price is RM853
RM1,206 total
includes taxes & fees
14 Jun - 15 Jun
Bahia Resort Hotel

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
8 km from Mission Bay
8.4 out of 10, Very good, (6,173 reviews)
"Enjoyed our stay."
United States
Debra
The price is RM618
RM858 total
includes taxes & fees
7 Jul - 8 Jul
Wyndham San Diego Bayside

Valli Hi Motel

Valli Hi Motel
2.5 star property
28.8 km from Mission Bay
8.4 out of 10, Very good, (1,017 reviews)
"Great place to stay."
United States
Allan
The price is RM367
RM418 total
includes taxes & fees
11 Jun - 12 Jun
Valli Hi Motel

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
24.7 km from Mission Bay
7.2 out of 10, Good, (1,026 reviews)
"Nice place to stay."
United States
Jacquie
The price is RM507
RM558 total
includes taxes & fees
14 Jun - 15 Jun
Ramada by Wyndham San Diego Poway Miramar

Best Western San Diego/Miramar Hotel

Best Western San Diego/Miramar Hotel
2.5 star property
16.1 km from Mission Bay
8.0 out of 10, Very good, (1,382 reviews)
"Great stay Really close to the cut water brewery!"
United States
Jessica
The price is RM518
RM596 total
includes taxes & fees
14 Jun - 15 Jun
Best Western San Diego/Miramar Hotel

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
5 km from Mission Bay
9.2 out of 10, Wonderful, (1,301 reviews)
"Great location, good parking, great staff."
United States
Rosemary
The price is RM794
RM913 total
includes taxes & fees
30 Jun - 1 Jul
Courtyard by Marriott San Diego Airport/Liberty Station

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,084 reviews)
"Staff was so great nice rooms really great stay"
United States
Amelia
The price is RM619
RM712 total
includes taxes & fees
15 Jun - 16 Jun
Holiday Inn Express San Diego Airport - Old Town by IHG

Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,057 reviews)
"Great location!"
United States
Jose
The price is RM536
RM616 total
includes taxes & fees
14 Jun - 15 Jun
Best Western Plus Hacienda Hotel Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and USS Midway Museum are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

Ocean Beach

With a secluded sunbathing beach, swimming-only beach, special surf beach, volleyball beach and dog beach, San Diego’s “OB” sure takes beaches seriously.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, San Diego Mission Bay Resort is one of the top choices for your stay in Mission Bay. This resort offers a full-service spa and 2 restaurants. Other good options for your stay in the neighbourhood include Paradise Point Resort & Spa and The Dana on Mission Bay.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach and Hotel Circle are some popular places to visit in the area around Mission Bay. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.