Hotels in Mission Beach, San Diego

    calendar shield illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
31 Aug - 1 Sept
Tomorrow
1 Sept - 2 Sept
Next weekend
5 Sept - 7 Sept
In two weeks
12 Sept - 14 Sept

Filter by

Guest rating
Guest rating
Property class

Top 10 Hotels in Mission Beach, San Diego

Our top choices for Mission Beach hotels

Hampton Inn & Suites San Diego Seaworld
Reception

Hampton Inn & Suites San Diego Seaworld

2.5 star property
8.6 out of 10, Excellent, (22)
"Staff was very friendly, hotel is modern and rooms spacious and clean. "
The price is RM499
RM574 total
includes taxes & fees
7 Sept - 8 Sept
Hampton Inn & Suites San Diego Seaworld
Best Western Yacht Harbor Hotel
Desk, blackout curtains, iron/ironing board, cots/infant beds

Best Western Yacht Harbor Hotel

2.5 star property
8.6 out of 10, Excellent, (1538)
"Great location, not too expensive!"
The price is RM422
RM484 total
includes taxes & fees
1 Sept - 2 Sept
Best Western Yacht Harbor Hotel
The Encinitan Hotel & Suites
Outdoor spa tub

The Encinitan Hotel & Suites

3.0 star property
8.0 out of 10, Very good, (1137)
"Great location "
The Encinitan Hotel & Suites
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
1 bedroom, individually decorated, individually furnished, free WiFi

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

3.0 star property
9.4 out of 10, Exceptional, (217)
"Loved this hotel!"
The price is RM627
RM707 total
includes taxes & fees
4 Sept - 5 Sept
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
Catamaran Resort and Spa
View from room

Catamaran Resort and Spa

4.0 star property
8.4 out of 10, Very good, (1037)
"Lovely hotel, great location, very family friendly and great facilities! "
The price is RM905
RM1,261 total
includes taxes & fees
14 Sept - 15 Sept
Catamaran Resort and Spa
The Wayfarer San Diego
Outdoor pool, a heated pool

The Wayfarer San Diego

4.0 star property
9.2 out of 10, Wonderful, (1588)
"Nice view and very relaxing place to stay."
The price is RM1,078
RM1,239 total
includes taxes & fees
2 Sept - 3 Sept
The Wayfarer San Diego
ITH Mission Beach Backpacker Hostel
Living area

ITH Mission Beach Backpacker Hostel

2.0 star property
9.4 out of 10, Exceptional, (184)
"Great"
ITH Mission Beach Backpacker Hostel
La Quinta Inn by Wyndham San Diego - Miramar
Reception

La Quinta Inn by Wyndham San Diego - Miramar

3.0 star property
7.6 out of 10, Good, (1022)
"The property felt safe and welcoming! "
The price is RM395
RM455 total
includes taxes & fees
1 Sept - 2 Sept
La Quinta Inn by Wyndham San Diego - Miramar
La Quinta Inn by Wyndham San Diego Chula Vista
Exterior

La Quinta Inn by Wyndham San Diego Chula Vista

3.0 star property
8.6 out of 10, Excellent, (1395)
"Great place to stay at , along with a good breakfast variety. Overall I'll stay here again"
The price is RM445
RM489 total
includes taxes & fees
7 Sept - 8 Sept
La Quinta Inn by Wyndham San Diego Chula Vista
Best Western San Diego Pacific Beach/Mission Bay
Outdoor pool

Best Western San Diego Pacific Beach/Mission Bay

2.5 star property
7.2 out of 10, Good, (1286)
"Excellent hotel !! "
The price is RM338
RM389 total
includes taxes & fees
1 Sept - 2 Sept
Best Western San Diego Pacific Beach/Mission Bay
Kings Inn San Diego
Reception

Kings Inn San Diego

2.5 star property
8.8 out of 10, Excellent, (3394)
"Very nice place to stay."
Kings Inn San Diego
Best Western Premier Hotel Del Mar
Front of property

Best Western Premier Hotel Del Mar

3.0 star property
9.4 out of 10, Exceptional, (1017)
"I have stayed here before, nice hotel"
The price is RM535
RM606 total
includes taxes & fees
7 Sept - 8 Sept
Best Western Premier Hotel Del Mar
Lamplighter Inn & Suites at SDSU
Outdoor pool, pool umbrellas, pool loungers

Lamplighter Inn & Suites at SDSU

2.5 star property
9.0 out of 10, Wonderful, (1251)
"We will definitely be staying there again"
Lamplighter Inn & Suites at SDSU
Days Inn by Wyndham San Diego-East/El Cajon
Desk, laptop workspace, iron/ironing board, free WiFi

Days Inn by Wyndham San Diego-East/El Cajon

2.0 star property
7.6 out of 10, Good, (1015)
"Place was nice and comfy. Decent stay at a very genuine price. "
The price is RM376
RM415 total
includes taxes & fees
1 Sept - 2 Sept
Days Inn by Wyndham San Diego-East/El Cajon
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
Free daily buffet breakfast

La Quinta Inn & Suites by Wyndham San Diego Mission Bay

3.0 star property
8.0 out of 10, Very good, (1358)
"Had good breakfast, quiet."
The price is RM453
RM520 total
includes taxes & fees
1 Sept - 2 Sept
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
HYATT house San Diego/Sorrento Mesa
Terrace/patio

HYATT house San Diego/Sorrento Mesa

3.0 star property
9.0 out of 10, Wonderful, (1007)
"This was one of the best properties we have stayed."
The price is RM719
RM826 total
includes taxes & fees
7 Sept - 8 Sept
HYATT house San Diego/Sorrento Mesa
Sea Harbor Hotel
Marina

Sea Harbor Hotel

2.0 star property
8.4 out of 10, Very good, (954)
"Good property for a few nights before your get on your boat for a fishing trip! "
The price is RM779
RM878 total
includes taxes & fees
18 Sept - 19 Sept
Sea Harbor Hotel
Best Western Americana Inn
Pillow-top beds, in-room safe, desk, laptop workspace

Best Western Americana Inn

2.5 star property
9.0 out of 10, Wonderful, (1143)
"Breakfast was amazing! "
The price is RM517
RM588 total
includes taxes & fees
8 Sept - 9 Sept
Best Western Americana Inn
Best Western Plus Marina Gateway Hotel
Premium bedding, in-room safe, desk, laptop workspace

Best Western Plus Marina Gateway Hotel

3.5 star property
9.2 out of 10, Wonderful, (3267)
"Good place to stay"
The price is RM529
RM583 total
includes taxes & fees
7 Sept - 8 Sept
Best Western Plus Marina Gateway Hotel
Valli Hi Motel
Desk, blackout curtains, soundproofing, free WiFi

Valli Hi Motel

2.5 star property
8.2 out of 10, Very good, (1012)
"Great hotel "
Valli Hi Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Where to stay in Mission Beach

Find the best Mission Beach areas for the activities you enjoy most.

Downtown San Diego

2 out of top 10 points of interest in this area

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Gaslamp Quarter showing night scenes, a bar and street scenes

Gaslamp Quarter

Cosy bars interesting history and top sights from Gaslamp Museum at the Davis-Horton House to Harlem of the West Sites – discover Gaslamp Quarter, a destination also famous for its shopping.

Pacific Beach Park showing a sandy beach

Pacific Beach

The stunning beaches and fantastic nightlife are just a few highlights of Pacific Beach. Make a stop by Mission Bay or Crystal Pier while you're exploring the area.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Ocean Beach Pier and Dog Beach.

Point Loma

Seaside views a bustling port and top sights from Marine Corps Recruit Depot to Shelter Island – discover Point Loma, a destination also famous for its island views.

Top Mission Beach Hotel Reviews

Explore a world of travel with Expedia

Explore a world of travel with Expedia

Frequently asked questions

What is Mission Beach like?

Travellers to San Diego's Mission Beach neighbourhood will be sure to enjoy a stay here. Experience the best of Mission Beach with a visit to Mission Bay and Mission Beach during your trip.

Where is the best hotel for a stay in Mission Beach?

Based on Expedia customer reviews, Boardwalk Hotel: Bikes, Boards & Beach Gear Included is the highest ranked property in Mission Beach. This hotel is a short 3-minute walk from Mission Beach, and it offers in-room kitchenettes and a beach bar. Other top choices in the neighbourhood include ITH Mission Beach Backpacker Hostel and The Wayfarer San Diego.

How many hotels are there in Mission Beach?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 1261 Mission Beach hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Beach, will I receive a refund?

Yes! You'll find that most room reservations are fully refundable if cancelled prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before check in. If you have a non-refundable reservation, you might be able to still cancel and get a refund within 24 hours of your booking. Enter your dates, click on "Search", then use the filter option "fully refundable" to review top deals in Mission Beach.

What are the top things to see and do in Mission Beach?

Enjoy a stroll along the shore at Mission Beach, Mission and Pacific Beaches and Pacific Beach while you're in Mission Beach. You could also plan a visit to Mission Bay or Belmont Park while you're in the neighbourhood. Sail Bay, The Promenade at Pacific Beach and Golf Gardens Miniature Golf are just a few of the places to visit in and around Mission Beach. While you're out sightseeing, Riviera Shores Beach and Bahia Point Beach are a couple of additional sights to visit in San Diego.