Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,431 reviews)
"Staff were very friendly and accommodating The resort was beautiful and location was amazing"
United States
Valerie
The price is RM787
RM1,113 total
includes taxes & fees
10 May - 11 May
San Diego Mission Bay Resort

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,623 reviews)
"Great hotel with great staff and amenities. Great location for a San Diego get away."
United States
Donald
The price is RM708
RM1,022 total
includes taxes & fees
10 May - 11 May
Hyatt Regency Mission Bay Spa and Marina

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,562 reviews)
"Everything in the hotel is especial recommend 100% amazing place familiar, best place for relaxing "
United States
Rolando
The price is RM747
RM1,068 total
includes taxes & fees
10 May - 11 May
Paradise Point Resort & Spa

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,311 reviews)
"My family and I had a great time, friendly staff "
United States
Brandon
The price is RM708
RM904 total
includes taxes & fees
10 May - 11 May
The Dana on Mission Bay

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,498 reviews)
"Great stay and family friendly "
United States
Gregory
The price is RM613
RM904 total
includes taxes & fees
13 May - 14 May
Sheraton San Diego Resort

Studio 6 Suites San Ysidro, CA -San Diego South Bay

Studio 6 Suites San Ysidro, CA -San Diego South Bay
2.5 star property
30.1 km from Mission Bay
8.0 out of 10, Very good, (1,620 reviews)
"Clean room, friendly and nice staff, easy parking and safe "
United States
Erik
The price is RM316
RM360 total
includes taxes & fees
3 May - 4 May
Studio 6 Suites San Ysidro, CA -San Diego South Bay

Brisa Pacific Hotel Encinitas

Brisa Pacific Hotel Encinitas
2.0 star property
32 km from Mission Bay
8.8 out of 10, Excellent, (1,005 reviews)
"Great place in a good location "
United States
Christopher
The price is RM416
RM458 total
includes taxes & fees
20 May - 21 May
Brisa Pacific Hotel Encinitas

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
24.7 km from Mission Bay
7.0 out of 10, Good, (1,009 reviews)
"Quick to checking in nice staff and breakfast was good there was plenty of parking lot to park"
United States
Ruffa Regina
The price is RM359
RM395 total
includes taxes & fees
30 Apr - 1 May
Ramada by Wyndham San Diego Poway Miramar

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
28.6 km from Mission Bay
9.0 out of 10, Wonderful, (1,263 reviews)
"Clean room, nice staff, a simple breakfast, and free parking on site."
United States
Nicole
The price is RM483
RM550 total
includes taxes & fees
6 May - 7 May
Best Western Americana Inn

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
6.8 km from Mission Bay
9.2 out of 10, Wonderful, (3,565 reviews)
"Great place and walking distance to many different places. Stayed before getting on a cruise."
United States
Lawrence
The price is RM531
RM610 total
includes taxes & fees
5 May - 6 May
Bay Club Hotel & Marina

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.6 out of 10, Excellent, (2,031 reviews)
"Great calming place to stay"
United States
Megan
The price is RM699
RM1,023 total
includes taxes & fees
18 May - 19 May
Bahia Resort Hotel

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,058 reviews)
"Great hotel and in a great location "
United States
Danielle
The price is RM400
RM460 total
includes taxes & fees
6 May - 7 May
GreenTree Inn San Diego Mission Bay

Pleasant Inn

Pleasant Inn
2.5 star property
8 km from Mission Bay
8.6 out of 10, Excellent, (1,376 reviews)
" Clean room friendly staff"
Canada
Laurent
The price is RM370
RM424 total
includes taxes & fees
7 May - 8 May
Pleasant Inn

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,210 reviews)
"Room was clean hotel was close to beach & restaurant "
United States
Andrea
The price is RM431
RM495 total
includes taxes & fees
30 Apr - 1 May
Wyndham Garden San Diego Near SeaWorld

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.0 out of 10, Wonderful, (1,066 reviews)
"It was clean and convenient to the airport."
United States
Joey L
The price is RM557
RM641 total
includes taxes & fees
3 May - 4 May
Holiday Inn Express San Diego Airport - Old Town by IHG

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
8 km from Mission Bay
8.4 out of 10, Very good, (6,125 reviews)
"The hotel is a great location."
United States
Regina
The price is RM645
RM885 total
includes taxes & fees
21 May - 22 May
Wyndham San Diego Bayside

Old Town Western Inn & Suites

Old Town Western Inn & Suites
2.5 star property
Old Town San Diego, 4 km from Mission Bay
7.8 out of 10, Good, (1,006 reviews)
"Staff was super friendly and located just short walk to downtown with good restaurants and coffee shop."
United States
Juan
The price is RM353
RM398 total
includes taxes & fees
3 May - 4 May
Old Town Western Inn & Suites

Ocean Beach Hotel

Ocean Beach Hotel
3.0 star property
Ocean Beach, 4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,325 reviews)
"Excellent location"
United States
Hyo seon
The price is RM711
RM802 total
includes taxes & fees
10 May - 11 May
Ocean Beach Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
5.6 km from Mission Bay
8.4 out of 10, Very good, (1,846 reviews)
"Very good breakfast offered; room was clean and comfortable; free parking; great area, close to downtown, Mission Beach and Liberty market. "
United States
Jeffrey
The price is RM379
RM435 total
includes taxes & fees
4 May - 5 May
Best Western Yacht Harbor Hotel

Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.2 out of 10, Wonderful, (1,866 reviews)
"Nice staff, so clean, very pleasant stay."
United States
Rachel
The price is RM620
RM711 total
includes taxes & fees
20 May - 21 May
Old Town Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

Ocean Beach

With a secluded sunbathing beach, swimming-only beach, special surf beach, volleyball beach and dog beach, San Diego’s “OB” sure takes beaches seriously.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach, Bahia Point Beach and Bay City Brewing Co. are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Sail Bay and Mission Bay Golf Course are also worth a stop.