An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Hotels in Mission Bay, San Diego

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Check prices for these dates

Next weekend
31 Jul - 2 Aug
In two weeks
7 Aug - 9 Aug

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

1. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,519 reviews)
"The rooms are always clean and it's a good place to stay for family time."
United States
Thoma
The price is RM978
RM1,340 total
includes taxes & fees
23 Aug - 24 Aug
San Diego Mission Bay Resort
2 outdoor pools, a heated pool, pool loungers

2. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,456 reviews)
"Would definitely stay here again."
United States
Jaspreet
The price is RM937
RM1,194 total
includes taxes & fees
16 Aug - 17 Aug
The Dana on Mission Bay
5 outdoor pools, a heated pool, pool umbrellas, pool loungers

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,774 reviews)
"Clean room, staff very helpful, lots of things to do"
United States
Rachel Ann
The price is RM988
RM1,352 total
includes taxes & fees
12 Aug - 13 Aug
Paradise Point Resort & Spa
2 outdoor pools, pool cabanas (surcharge), pool umbrellas

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,641 reviews)
"Good place nice staff"
United States
kyle
The price is RM978
RM1,340 total
includes taxes & fees
26 Aug - 27 Aug
Hyatt Regency Mission Bay Spa and Marina
Exterior

5. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,493 reviews)
"Clean room and easy parking"
United States
Maribel
The price is RM510
RM586 total
includes taxes & fees
23 Aug - 24 Aug
Hilton Garden Inn San Diego Old Town/SeaWorld Area
In-room safe, desk, laptop workspace, blackout curtains

6. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,003 reviews)
"It was very nice and clean staff was very friendly ."
United States
Sindia
The price is RM638
RM733 total
includes taxes & fees
24 Aug - 25 Aug
Holiday Inn Express San Diego - SeaWorld Area by IHG
View from room

7. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,144 reviews)
"Nice and safe place to stay"
United States
Dominador
The price is RM600
RM690 total
includes taxes & fees
17 Aug - 18 Aug
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
Lobby

8. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,187 reviews)
"very good would stay again"
United States
Raygan
The price is RM540
RM621 total
includes taxes & fees
10 Aug - 11 Aug
Wyndham Garden San Diego Near SeaWorld
Lobby

9. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,703 reviews)
"Great clean hotel close to the airport. Would definitely stay again."
United States
Aimee
The price is RM651
RM748 total
includes taxes & fees
23 Aug - 24 Aug
Hampton Inn & Suites San Diego Airport Liberty Station
Exterior

10. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,672 reviews)
"Great hotel!"
United States
Julie
The price is RM536
RM617 total
includes taxes & fees
4 Aug - 5 Aug
Hampton Inn San Diego/Mission Valley
Lobby

11. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (3,930 reviews)
"The hotel was clean and staff were super nice. The breakfast was excellent."
United States
Leticia
The price is RM487
RM560 total
includes taxes & fees
16 Aug - 17 Aug
Comfort Inn Sea World Area
Exterior

12. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,923 reviews)
"Well kept, great location and would definitely recommend and stay again!"
United States
Jennifer
The price is RM668
RM766 total
includes taxes & fees
25 Aug - 26 Aug
Old Town Inn
Outdoor pool, pool loungers

13. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,084 reviews)
"The included breakfast buffet was a great perk and the staff were very friendly."
United States
Allan
The price is RM585
RM673 total
includes taxes & fees
23 Aug - 24 Aug
Best Western Plus Hacienda Hotel Old Town
Lobby sitting area

14. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,273 reviews)
"Clean room good breakfast parking was close"
United States
Jerry
The price is RM444
RM511 total
includes taxes & fees
25 Aug - 26 Aug
GreenTree Inn San Diego Mission Bay
Free daily full breakfast

15. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (2,848 reviews)
"Staff was friendly and hotel service was great!"
United States
Mike and Maria
The price is RM650
RM748 total
includes taxes & fees
9 Aug - 10 Aug
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
Exterior

16. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,082 reviews)
"Very good hotel at the price with good choice of breakfast."
United States
Tirthankar
The price is RM619
RM711 total
includes taxes & fees
3 Aug - 4 Aug
Holiday Inn Express San Diego Airport - Old Town by IHG
Exterior

17. Courtyard by Marriott Old Town

Courtyard by Marriott Old Town
3.0 star property
Old Town San Diego, 3.9 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"Always enjoy our stay so convenient!"
United States
Carmen
The price is RM608
RM699 total
includes taxes & fees
23 Aug - 24 Aug
Courtyard by Marriott Old Town
Meeting facility

18. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,665 reviews)
"It was great staying here second time we stay here and we love it"
United States
Jose
The price is RM662
RM760 total
includes taxes & fees
23 Aug - 24 Aug
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
Desk, laptop workspace, blackout curtains, iron/ironing board

19. SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3.1 km from Mission Bay
8.0 out of 10, Very good, (1,569 reviews)
"Good breakfast and clean room, I love the size of the restroom and just perfect"
United States
Evangeline
The price is RM552
RM624 total
includes taxes & fees
28 Jul - 29 Jul
SureStay Hotel by Best Western San Diego Pacific Beach
View from room

20. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,605 reviews)
"Perfect hotel for family fun."
United States
Andre
The price is RM601
RM898 total
includes taxes & fees
24 Aug - 25 Aug
Sheraton San Diego Resort
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.
A plaza with a traditional building, benches, and a large tree.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

A beach with surfers and swimmers during sunset.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

A roller coaster under construction with scaffolding and a ticket booth in the foreground.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

With a secluded sunbathing beach, swimming-only beach, special surf beach, volleyball beach and dog beach, San Diego’s “OB” sure takes beaches seriously.

Top Mission Bay Hotel Reviews

Hotel del Coronado, Curio Collection by Hilton

Hotel del Coronado, Curio Collection by Hilton

10/10 Excellent
"We had a great time for the 2 days there. Luckily it was not exceeding crowed (for mid July) which made reservations and use of the facilities easy. Did not expect it to be as much of a family place as it was, but that was great to see. Love the beach but beware of the water because of the Tijuana river pollution."
John 2-night trip
Posted 1 hour ago
Hotel del Coronado, Curio Collection by Hilton

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches and North Cove Beach while you're in Mission Bay. You could also plan a visit to Mission Bay or The Dana On Mission Bay, BW Premier Collection while you're in the neighbourhood. Don't miss favourite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot and Hotel Circle. When you're sightseeing in San Diego, Crown Point Shores and Marina Village Conference Center are also worth a stop.