What is Mission Bay like?

You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.

What's a favourite hotel to stay in Mission Bay?

Based on Expedia customer reviews, Paradise Point Resort & Spa is the highest ranked property in Mission Bay. This resort offers a marina and 5 outdoor pools. Other favourite options in the area include The Dana on Mission Bay and San Diego Mission Bay Resort .

How many hotels should I expect to find in the Mission Bay area?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.

What is there to do around this San Diego neighbourhood?

Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or Mission Bay Golf Course while you're in the neighbourhood. Mission Beach, North Cove Beach and Bahia Point Beach are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Bay City Brewing Co. and Sail Bay are also worth a stop.

Hotels in Mission Bay, San Diego

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Dates

February 2026

March 2026

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Our top choices for Mission Bay hotels

2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

Mission Bay

Megan

RM834 total

includes taxes & fees

25 Jan - 26 Jan

5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Mission Bay

samantha

RM863 total

includes taxes & fees

21 Jan - 22 Jan

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

Mission Bay

Dani

RM924 total

includes taxes & fees

2 Feb - 3 Feb

3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Brandon

RM908 total

includes taxes & fees

25 Jan - 26 Jan

Embassy Suites by Hilton San Diego La Jolla

11 km from Mission Bay

Fernando

RM788 total

includes taxes & fees

24 Jan - 25 Jan

Hampton Inn San Diego-Kearny Mesa

9.9 km from Mission Bay

Vevean

RM568 total

includes taxes & fees

28 Jan - 29 Jan

Inn By The Sea La Jolla

9.1 km from Mission Bay

Sydney

RM742 total

includes taxes & fees

22 Jan - 23 Jan

Hampton Inn & Suites by Hilton San Diego SeaWorld

2.8 km from Mission Bay

Wilfredo

RM511 total

includes taxes & fees

26 Jan - 27 Jan

Hampton Inn & Suites San Diego Airport Liberty Station

5.3 km from Mission Bay

Alison

RM788 total

includes taxes & fees

29 Jan - 30 Jan

Courtyard by Marriott San Diego Airport/Liberty Station

5 km from Mission Bay

Benny

RM784 total

includes taxes & fees

23 Jan - 24 Jan

Empress Hotel of La Jolla

9 km from Mission Bay

Rachel

RM878 total

includes taxes & fees

25 Jan - 26 Jan

The Shoal La Jolla Beach

7.8 km from Mission Bay

Nick

RM532 total

includes taxes & fees

25 Jan - 26 Jan

Homewood Suites by Hilton San Diego Airport/Liberty Station

5.3 km from Mission Bay

Pamela

RM891 total

includes taxes & fees

30 Jan - 31 Jan

The Inn at Sunset Cliffs

Ocean Beach, 5.4 km from Mission Bay

Katrina

RM985 total

includes taxes & fees

21 Jan - 22 Jan

La Quinta Inn & Suites by Wyndham San Diego Mission Bay

North Pacific Beach, 3.5 km from Mission Bay

Sandra

RM461 total

includes taxes & fees

21 Jan - 22 Jan

The Beach Cottages

Pacific Beach, 3.5 km from Mission Bay

Nicole

RM512 total

includes taxes & fees

22 Jan - 23 Jan

PB Surf Beachside Inn

North Pacific Beach, 4.2 km from Mission Bay

Alejandro

RM408 total

includes taxes & fees

21 Jan - 22 Jan

HYATT house San Diego/Sorrento Mesa

14 km from Mission Bay

Karla

RM671 total

includes taxes & fees

6 Feb - 7 Feb

Sea Harbor Hotel

5.9 km from Mission Bay

Mark

Ocean Beach Hotel

Ocean Beach, 4.2 km from Mission Bay

Trinity

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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

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Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

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Ocean Beach

With a secluded sunbathing beach, swimming-only beach, special surf beach, volleyball beach and dog beach, San Diego’s “OB” sure takes beaches seriously.

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