A seaside view with a white umbrella and wicker chairs.

Best Boutique Hotels in Heraklion

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in
  • Be picky

    Search almost a million properties worldwide

Check availability on Heraklion Boutique Hotels

Tonight
8 Sept - 9 Sept
Tomorrow
9 Sept - 10 Sept
This weekend
11 Sept - 13 Sept
Next weekend
18 Sept - 20 Sept

Our top choices for Heraklion boutique hotels

1. Lato Boutique Hotel

Lato Boutique Hotel
Heraklion
United States
ISTVAN
RM364
RM461 total
includes taxes & fees
13 Sept - 14 Sept
Lato Boutique Hotel

2. Dom Boutique Hotel

Dom Boutique Hotel
Heraklion
Australia
Sanjeewa
RM615
RM747 total
includes taxes & fees
7 Oct - 8 Oct
Dom Boutique Hotel

3. Axel Beach Crete - Adults Only

Axel Beach Crete - Adults Only
Hersonissos
United Kingdom
Omena
RM286
RM373 total
includes taxes & fees
8 Oct - 9 Oct
Axel Beach Crete - Adults Only

4. Casa Blu - Adults Only by Checkin

Casa Blu - Adults Only by Checkin
Hersonissos
France
Elsa Janine Berbiche
RM526
RM645 total
includes taxes & fees
16 Sept - 17 Sept
Casa Blu - Adults Only by Checkin

5. Castello Boutique Resort & Spa - Adults Only

Castello Boutique Resort & Spa - Adults Only
Agios Nikolaos
United States
Lisa
RM747
RM919 total
includes taxes & fees
3 Oct - 4 Oct
Castello Boutique Resort & Spa - Adults Only

6. Nostos Beach Boutique Hotel

Nostos Beach Boutique Hotel
Mylopotamos
United Kingdom
Simon
RM522
RM641 total
includes taxes & fees
1 Oct - 2 Oct
Nostos Beach Boutique Hotel

7. Minos Boutique Hotel Agia Galini

Minos Boutique Hotel Agia Galini
Agios Vasileios
Canada
Jean-Marc
RM466
RM553 total
includes taxes & fees
12 Sept - 13 Sept
Minos Boutique Hotel Agia Galini

8. Riviera Beach Hotel

Riviera Beach Hotel
Hersonissos
United Kingdom
michelle
RM585
RM689 total
includes taxes & fees
4 Oct - 5 Oct
Riviera Beach Hotel

9. Kahlua Boutique Hotel - Adults Only

Kahlua Boutique Hotel - Adults Only
Hersonissos
United Kingdom
Dmytro
RM984
RM1,167 total
includes taxes & fees
11 Sept - 12 Sept
Kahlua Boutique Hotel - Adults Only

10. Palazzo Greco

Palazzo Greco
Agios Vasileios
United Kingdom
John
RM358
RM454 total
includes taxes & fees
4 Oct - 5 Oct
Palazzo Greco
View all properties

Top Heraklion Hotel Reviews

GDM Megaron Historical Monument Hotel

GDM Megaron Historical Monument Hotel

8/10 Good
"Great hotel, classy but not pretentious, close to the ferry port. Staff were really helpful and welcoming. Nicely appointed room. Excellent roof terrace with pool overlooking Venetian harbor. Only down side is it’s right on the path of aircraft taking off from Heraklion so it’s quite noisy."
Jeremy 1-night trip
Posted 17 hours ago
GDM Megaron Historical Monument Hotel
Infinity City Boutique Hotel

Infinity City Boutique Hotel

10/10 Excellent
"Excellent hotel within walking distance of the port for our short stop over in Heraklion . Staff very helpful and allowed us to have early breakfast before our ferry ."
Caroline 1-night trip
Posted 2 days ago
Infinity City Boutique Hotel
Olive Green Hotel

Olive Green Hotel

10/10 Excellent
"Excellent déjeuner"
Alain 5-night trip
Posted 3 days ago
Olive Green Hotel

Frequently asked questions

What's the best boutique-style hotel in Heraklion?
Dom Boutique Hotel is a favourite hotel with our travellers looking for stylish accommodation, and features 37 guestrooms, a fitness centre and free WiFi. If you'd prefer to stay at a boutique hotel, you can also take a look at Lato Boutique Hotel.
What's there to see and do in Heraklion?
Visitors speak positively about this destination's major shopping centres, top museums and interesting historical sites. Activities and attractions to experience around Heraklion include Heraklion Port, Heraklion Loggia and Heraklion Town Hall. You might also like to explore more of the area and take in additional sights like Lions Square, Heraklion Archaeological Museum and Historical Museum of Crete while you're here.
What kind of weather should I plan for when I travel to Heraklion?
Getting an idea of what to expect from the weather in Heraklion is important when planning your trip. The hottest months are usually July and August, with an average temperature of 25°C, while the coldest months are January and February, with an average of 13°C. Average annual precipitation for Heraklion is 350 mm.
What's the best way to get to my boutique hotel in Heraklion?
You have a few options for travelling to and around Heraklion. The closest major airport is Heraklion (HER-Nikos Kazantzakis), which is located 2.3 mi (3.7 km) from the heart of the city. If you'd like to explore around the area, you may want a rental car for your journey.