10 Best Spa Hotels in Flores for 2026

A beach with clear turquoise water, boats, and lush green hills.

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Check availability on Flores Hotels with Spa

Tonight

Tomorrow

This weekend

Next weekend

Our top choices for Flores hotels with a spa

A modern spa room with two beds, a large bathtub, and a view of boats and a distant island.

A poolside area with lounge chairs and a view of a harbor with boats.

A modern hotel with multiple floors, a waterfront view, and a mountain in the background.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

1. Meruorah Komodo Labuan Bajo

Labuan Bajo

Immerse in tropical wellness at this beachfront retreat with couples spa rooms and relaxing ocean views.

RM418

RM505 total

includes taxes & fees

6 Nov - 7 Nov

A modern hotel entrance with a wooden pathway leading to a reception area, surrounded by water features and greenery.

A resort with overwater bungalows connected by walkways, surrounded by clear turquoise water and lush green hills.

A wooden deck with a massage chair and a small table with glasses and a bottle, overlooking a calm sea at sunset.

A spacious lobby with a modern design, featuring a large seating area, wooden accents, and large windows offering a view of the sea.

2. Katamaran Hotel & Resort Komodo

Labuan Bajo

Escape to this tropical retreat with beachside spa cabanas and aromatherapy treatments, nestled beside a nature reserve for total serenity.

RM551

RM667 total

includes taxes & fees

27 Oct - 28 Oct

A swimming pool with a thatched-roof structure, palm trees, and lounge chairs.

A modern bedroom with a large bed, a TV, and a dining area with a table and chairs.

A modern bedroom with a large bed, a desk with a TV, and a balcony with a view of the sea.

A house with a large garden, a pond, and a thatched roof.

3. Sudamala Resort, Komodo, Labuan Bajo

Labuan Bajo

Tranquil black sand beach retreat with indulgent couples spa treatments and poolside dining creates the perfect wellness escape.

RM452

RM546 total

includes taxes & fees

6 Nov - 7 Nov

A modern interior with a round dining table, a large central planter, and a seating area with a sofa and chairs.

A hotel room with a bed, a desk, a chair, a table with fruits, and a view of a mountain and water.

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

4. AYANA Komodo Waecicu Beach

Labuan Bajo

Tropical spa escape with ocean views offers beachfront relaxation and rejuvenation treatments.

RM686

RM830 total

includes taxes & fees

22 Oct - 23 Oct

A hot tub surrounded by plants and a wooden deck.

A luxurious villa with a swimming pool, surrounded by lush greenery and rocky terrain.

Overwater bungalows with wooden structures and lounge chairs, connected by a wooden deck over calm water, with a mountainous backdrop.

A wooden overwater bungalow with a conical roof, a deck, and a lounge chair.

5. Menjaga Bay

Macang Tanggar

Tropical spa sanctuary offers coastal rejuvenation with bay views, beachfront location, and outdoor treatment areas for pure serenity.

RM414

RM501 total

includes taxes & fees

14 Nov - 15 Nov

A wooden deck with a bench and a massage table, overlooking a calm sea.

A room with a bed, a table, and a chair. There is a window with curtains and a view of the outside.

A coastal building with a wooden facade, a stone pathway, and a view of the sea and a pier in the background.

A coastal building with a wooden deck overlooking the sea, large rocks in the foreground, and a pier in the background.

6. Plataran Komodo Resort & Spa

Labuan Bajo

Indulge in beachfront bliss at this Komodo resort, where a full-service spa and private shoreline create the ultimate relaxation sanctuary.

RM1,071

RM1,296 total

includes taxes & fees

20 Oct - 21 Oct

A cave-like bathroom with natural rock walls, multiple sinks, and a wooden shelf with toiletries.

A beachside lounge with lounge chairs and tables, a pool, and a view of the sea and islands.

A swimming pool with white buildings and blue doors.

A bedroom with two beds, a TV, a desk, and a view of the beach.

7. Loccal Collection Hotel

Labuan Bajo

Luxurious spa retreat with daily couples treatments and stunning sunset views beckons at this upscale Labuan Bajo haven.

RM275

RM332 total

includes taxes & fees

20 Oct - 21 Oct

A hotel lobby with a reception desk, seating area, and a decorative wall.

A hotel with a pool, a pier, and boats on the water.

A beach with overwater bungalows and a pier extending into calm waters.

A poolside view with thatched-roof structures and palm trees at sunset.

8. LAPRIMA Hotel Flores

Labuan Bajo

RM224

RM271 total

includes taxes & fees

20 Oct - 21 Oct

View all properties

Choose what matters most at spa hotels in Flores

Pool

Breakfast included

Hot tub

4 stars

5 stars

Spa hotels with pools in Flores

A sunlit infinity pool with lounge chairs and umbrellas, overlooking a body of water and a distant island.

Katamaran Hotel & Resort Komodo

Labuan Bajo

RM551

RM667 total

includes taxes & fees

27 Oct - 28 Oct

A coastal landscape with a small island, clear waters, and distant mountains.

A spacious lobby with wicker furniture, a bar area, and a sign for Meruora Hotel.

Meruorah Komodo Labuan Bajo

Labuan Bajo

RM418

RM505 total

includes taxes & fees

6 Nov - 7 Nov

A room with two beds, wooden flooring, and large windows overlooking a body of water.

A wooden deck with a pool, overlooking a body of water and a hilly landscape.

Menjaga Bay

Macang Tanggar

RM414

RM501 total

includes taxes & fees

14 Nov - 15 Nov

Sudamala Resort, Komodo, Labuan Bajo

Labuan Bajo

RM452

RM546 total

includes taxes & fees

6 Nov - 7 Nov

A dining area with a view of the sea and a sunset, featuring round tables with placemats and white tablecloths.

A reception area with marble walls, potted plants, and a modern design.

Loccal Collection Hotel

Labuan Bajo

RM275

RM332 total

includes taxes & fees

20 Oct - 21 Oct

An aerial view of a small island with clear turquoise waters, a sandy beach, and a few boats.

AYANA Komodo Waecicu Beach

Labuan Bajo

RM686

RM830 total

includes taxes & fees

22 Oct - 23 Oct

An aerial view of a beach with a wooden pier extending into turquoise waters, a swimming pool, and thatched-roof structures.

A row of thatched-roof cottages with white railings and stone walls, surrounded by tropical plants and a paved walkway.

A bedroom with a bed, a wooden floor, a balcony with a view of the sea, and a thatched roof.

An aerial view of a beach resort with a swimming pool, lounge chairs, and thatched-roof structures.

Sudamala Resort, Seraya, Flores

Labuan Bajo

RM615

RM745 total

includes taxes & fees

13 Nov - 14 Nov

A hillside property with three overwater villas featuring private pools and thatched roofs.

A coastal hotel with a beach view, a dining area, and a pool.

Plataran Komodo Resort & Spa

Labuan Bajo

RM1,071

RM1,296 total

includes taxes & fees

20 Oct - 21 Oct

A circular pool with a tree in the center, surrounded by lush greenery.

A wooden cabin with a pitched roof, a front porch with seating, and a gravel pathway.

A row of wooden cabins with a paved path leading to them, surrounded by lush greenery.

A bedroom with a large bed, a TV mounted on the wall, a wooden ceiling, and a view of greenery outside.

Tahoma Villas Labuan Bajo by ABM

Labuan Bajo

RM206

RM249 total

includes taxes & fees

26 Oct - 27 Oct

An aerial view of a resort with a swimming pool, palm trees, and red-roofed buildings.

LAPRIMA Hotel Flores

Labuan Bajo

RM224

RM271 total

includes taxes & fees

20 Oct - 21 Oct

View all properties