Best Boutique Hotels in San Francisco

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Our top choices for San Francisco boutique hotels

Games room
Hotel Zephyr San Francisco

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2321)
"Excellent location."
United States
Rena
The price is RM570
RM816 total
includes taxes & fees
9 Jan - 10 Jan 2026
Hotel Zephyr San Francisco
Premium bedding, pillow-top beds, in-room safe, desk
Inn At Union Square

Inn At Union Square

Inn At Union Square
3.5 star property
Union Square
9.2 out of 10, Wonderful, (1003)
"Clean room, welcoming staff, we would stay again. "
United States
Natalie
The price is RM426
RM605 total
includes taxes & fees
16 Dec - 17 Dec
Inn At Union Square
Lobby
The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1001)
"cleanliness,good service, convenient location"
United States
Harry
The price is RM657
RM943 total
includes taxes & fees
24 Dec - 25 Dec
The Clancy, Autograph Collection by Marriott
Lobby sitting area
The Marker Union Square San Francisco

The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.0 out of 10, Wonderful, (1099)
"Beautiful hotel with very friendly staff!! Location is also very central, walkable to a lot of restaurants. "
United States
Akila
The price is RM553
RM651 total
includes taxes & fees
9 Jan - 10 Jan 2026
The Marker Union Square San Francisco
City view
Taj Campton Place

Taj Campton Place

Taj Campton Place
5.0 star property
Union Square
9.2 out of 10, Wonderful, (1001)
"Wonderful Staff and hospitality."
United States
Rachel
The price is RM731
RM1,002 total
includes taxes & fees
24 Dec - 25 Dec
Taj Campton Place
Exterior
Argonaut Hotel

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1201)
"Great location, excellent staff."
United States
Walter
The price is RM846
RM1,169 total
includes taxes & fees
4 Jan - 5 Jan 2026
Argonaut Hotel
Meeting facility
The Barnes San Francisco, Tapestry Collection by Hilton

The Barnes San Francisco, Tapestry Collection by Hilton

The Barnes San Francisco, Tapestry Collection by Hilton
4.0 star property
Union Square
8.2 out of 10, Very good, (764)
"Great location, friendly staff."
Canada
Lucy
The price is RM501
RM589 total
includes taxes & fees
24 Dec - 25 Dec
The Barnes San Francisco, Tapestry Collection by Hilton
Lobby
Warwick San Francisco

Warwick San Francisco

Warwick San Francisco
4.0 star property
Union Square
8.2 out of 10, Very good, (1001)
"Room was very nice! Staff was wonderful! "
United States
Brian
The price is RM452
RM681 total
includes taxes & fees
14 Dec - 15 Dec
Warwick San Francisco
Egyptian cotton sheets, premium bedding, pillow-top beds, minibar
Palihotel San Francisco

Palihotel San Francisco

Palihotel San Francisco
3.5 star property
Union Square
8.4 out of 10, Very good, (624)
"Great vibe here and the rooms and so cute . Excellent bar and bar staff . "
United States
Lana
The price is RM410
RM586 total
includes taxes & fees
15 Dec - 16 Dec
Palihotel San Francisco
Garden
Hotel Kabuki, part of JdV by Hyatt

Hotel Kabuki, part of JdV by Hyatt

Hotel Kabuki, part of JdV by Hyatt
4.0 star property
Western Addition
9.0 out of 10, Wonderful, (1001)
"Very helpful staff Enjoyed the good coffee and tea too"
United States
Michael
The price is RM846
RM1,153 total
includes taxes & fees
1 Jan - 2 Jan 2026
Hotel Kabuki, part of JdV by Hyatt
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top San Francisco Hotel Reviews

Handlery Union Square Hotel

Handlery Union Square Hotel

10/10 Excellent
"Clean hotel, great location, kind staff! "
Felix 1-night trip
Posted 1 day ago
Handlery Union Square Hotel

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Frequently asked questions

Searching for a cosy accommodation option for your visit to San Francisco?
A boutique hotel may fit the bill if you like small hotels with quality service and good atmosphere. Choose from 21 boutique-style accommodation options in San Francisco to find a property that captures this destination's local spirit.
What's the best boutique accommodation in San Francisco?
The Marker Union Square San Francisco is a favourite hotel with Expedia travellers looking for a stylish stay, and features a 24-hour fitness centre and a fireplace in the lobby. Inn At Union Square and Hotel Zephyr San Francisco are other choices for a boutique stay.
How many boutique hotels can I expect to find in San Francisco?
Expedia has 21 boutique hotels in San Francisco.
What's there to see and do in San Francisco?
Visitors speak positively about this destination's major shopping centres, scenic landscape and art galleries. Favorite activities and sights around San Francisco include Oracle Park, Pier 39 and Chase Center. For even more to see and do, make a stop at Westin St Francis Hotel Glass Elevators, Union Square and SHN Curran Theatre.
What kind of weather should I plan for when I travel to San Francisco?
Getting an idea of what to expect from the weather in San Francisco will help you enjoy your stay to the fullest. The hottest months are usually September and August, with an average temperature of 18°C, while the coldest months are January and February, with an average of 11°C. Average annual precipitation for San Francisco is 448 mm.
What's the best way to get to my boutique hotel in San Francisco?
You have a few options for transportation to and around San Francisco. The closest major airport is Oakland, CA (OAK-Oakland Intl.), which is located 11.8 mi (19.1 km) away. Take advantage of metro transport at Powell St & Geary Blvd Stop, Powell St & Post St Stop and Powell St & O'Farrell St Stop.