Top 10 Aegean Islands Boutique Hotels for 2026 | Expedia Malaysia

A clear beach with turquoise water, a sandy shore, and buildings in the background.

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Check availability on Aegean Islands Boutique Hotels

Tonight

23 Oct - 24 Oct

Tomorrow

24 Oct - 25 Oct

This weekend

23 Oct - 25 Oct

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Our top choices for Aegean Islands boutique hotels

A breakfast table with croissants, fruit, pancakes, and orange juice, overlooking a harbor with boats and white buildings.

A modern, minimalist bedroom with a large bed, a sofa, a TV, and a view of the outdoors.

A view from a balcony overlooking a swimming pool, a Christmas tree, and a marina with boats.

A modern kitchen with white cabinets, a wooden countertop, and a built-in dishwasher. There is a round woven rug on the floor, and pendant lights hang above the island.

1. Kouros Village

Antiparos

United States

Michael

RM294

RM379 total

includes taxes & fees

24 Oct - 25 Oct

A modern outdoor seating area with a sofa, two wicker chairs, a round table, and a hanging light fixture.

A seating area with wicker chairs, a round table, and shelves with decorative items.

A modern living room with a black sofa, white armchairs, a coffee table with fruits, a TV, and a white cabinet.

A reception area with a modern design, featuring a reception desk, framed pictures on the wall, and pendant lighting.

2. APOLLON Design Boutique Hotel

Paros

Canada

Lazaros

RM267

RM327 total

includes taxes & fees

26 Oct - 27 Oct

A modern indoor pool area with a wooden deck, a glass door leading to a bedroom, and circular wall lights.

A modern, well-lit room with a wooden desk, a comfortable chair, a flat-screen TV, and a bed.

A wooden table with a bottle of wine, two glasses, and a bowl of fruit on a balcony overlooking a beach and sea.

A modern spa area with a rectangular hot tub, dark wooden flooring, and minimalist decor.

3. Argo Boutique Hotel

Old Town Naxos

United States

Cynthia

RM321

RM410 total

includes taxes & fees

31 Oct - 1 Nov

An outdoor seating area with stone pillars, wicker furniture, and a view of the sea.

A modern hotel room with a large sliding glass door leading to a balcony with a view of the sea and hills. There is a cozy seating area with a sofa and a round table, and a stylish pendant light hangs above.

A spacious interior with a bar area, seating arrangements, and a view of the outdoors.

A hotel room with a large bed, a chair, a lamp, and a view of the outdoors.

4. Ydor Hotel & Spa

Kea

United Kingdom

Luminita

RM489

RM624 total

includes taxes & fees

31 Oct - 1 Nov

A swimming pool with a clear view of the water, a white poolside area, and two empty glasses on a white surface.

A waterfront resort with outdoor seating, a pool, and boats in the background.

A spacious indoor area with a high ceiling, modern chandeliers, and a view of the sea through large windows.

A spacious bedroom with a large bed, a bathroom with a large mirror, and a view of the sea.

5. Nissaki Boutique Hotel

Mykonos

United States

Arisel

RM1,007

RM1,215 total

includes taxes & fees

25 Oct - 26 Oct

A coastal property with multiple buildings, a swimming pool, and a view of the sea and cliffs.

A bedroom with a bed, a desk, and a chair. There is a view of the sea through the open door.

A modern white building with a staircase leading to a door, surrounded by greenery and a view of the sea.

A wooden table with bowls of food on a patio overlooking a pool and the sea.

6. Milos Breeze Boutique Hotel

Apollonia

United States

Michael

RM1,123

RM1,324 total

includes taxes & fees

24 Oct - 25 Oct

A balcony with white chairs and a table, overlooking a beach with a clear view of the sea and buildings in the distance.

A modern interior with a curved white wall, a 'nama' sign, and a wooden grid structure.

A modern reception area with a large illuminated sign reading "nama" and a clean, minimalist design.

A coastal town with a prominent building featuring balconies and a bank named "Alpha Bank".

7. Nama Boutique Hotel

Tinos

United States

ANDREW

RM420

RM501 total

includes taxes & fees

26 Oct - 27 Oct

A buffet with various food items including fruits, vegetables, and desserts.

A rooftop pool area with a glass balustrade, a lounge chair, and a sun umbrella.

A multi-story hotel with a central courtyard, balconies, and a rooftop terrace.

A hotel room with a large bed, a desk, a chair, a small refrigerator, a staircase, and a nightstand with a lamp.

8. Theofilos Paradise Boutique Hotel

Lesvos

United States

Caroline

RM472

RM563 total

includes taxes & fees

25 Oct - 26 Oct

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Top Aegean Islands Hotel Reviews

Harmony Boutique Hotel

Harmony Boutique Hotel

10/10 Excellent

"Un hotel de ensueño decorado hasta el ultimo detalle, muy bien ubicado, El desayuno buenisimo,"

Athina Luxury Suites

Athina Luxury Suites

10/10 Excellent

"perfect choice for us"